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Info • Metschnikowia sp. yHQL305 v1.0

Status

[December 2020] The Metschnikowia sp. yHQL305 v1.0 genome was sequenced with PacBio, assembled with Falcon, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Metschnikowia sp. yHQL305 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 17.69
Sequencing read coverage depth 425.09x
# of contigs 33
# of scaffolds 33
# of scaffolds >= 2Kbp 33
Scaffold N50 3
Scaffold L50 (Mbp) 3.18
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 3.76, 3.57, 3.18


Gene Models FilteredModels2
length (bp) of: average median
gene 1479 1227
transcript 1444 1197
exon 1176 966
intron 155 80
description:
protein length (aa) 481 399
exons per gene 1.23 1
# of gene models 5744


Collaborators

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.