Info • Actinomortierella ambigua BC1291


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 37.57
Sequencing read coverage depth
# of contigs 2351
# of scaffolds 2279
# of scaffolds >= 2Kbp 1455
Scaffold N50 262
Scaffold L50 (Mbp) 0.04
# of gaps 72
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.25, 0.23, 0.18

Gene Models ExternalModels
length (bp) of: average median
gene 2160 1773
transcript 1671 1308
exon 477 225
intron 198 135
protein length (aa) 557 436
exons per gene 3.50 3
# of gene models 9860


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.