Info • Linnemannia elongata GBA40


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 46.81
Sequencing read coverage depth
# of contigs 4956
# of scaffolds 4256
# of scaffolds >= 2Kbp 3120
Scaffold N50 611
Scaffold L50 (Mbp) 0.02
# of gaps 700
% of scaffold length in gaps 0.2%
Three largest Scaffolds (Mbp) 0.12, 0.12, 0.12

Gene Models ExternalModels
length (bp) of: average median
gene 1944 1673
transcript 1497 1230
exon 407 213
intron 169 119
protein length (aa) 499 410
exons per gene 3.68 3
# of gene models 12658


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.