Info • Linnemannia elongata NVP5


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 46.03
Sequencing read coverage depth
# of contigs 6224
# of scaffolds 5336
# of scaffolds >= 2Kbp 3967
Scaffold N50 884
Scaffold L50 (Mbp) 0.02
# of gaps 888
% of scaffold length in gaps 0.2%
Three largest Scaffolds (Mbp) 0.12, 0.09, 0.08

Gene Models ExternalModels
length (bp) of: average median
gene 1870 1586
transcript 1442 1167
exon 401 213
intron 167 119
protein length (aa) 481 389
exons per gene 3.60 3
# of gene models 12746


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.