Info • Linnemannia elongata NVP71


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 45.60
Sequencing read coverage depth
# of contigs 7261
# of scaffolds 6092
# of scaffolds >= 2Kbp 4494
Scaffold N50 1061
Scaffold L50 (Mbp) 0.01
# of gaps 1169
% of scaffold length in gaps 0.3%
Three largest Scaffolds (Mbp) 0.09, 0.08, 0.07

Gene Models ExternalModels
length (bp) of: average median
gene 1821 1550
transcript 1390 1128
exon 386 210
intron 168 119
protein length (aa) 463 376
exons per gene 3.60 3
# of gene models 12313


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.