Info • Podila epigama NRRL 5512


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 32.91
Sequencing read coverage depth
# of contigs 4491
# of scaffolds 3903
# of scaffolds >= 2Kbp 2909
Scaffold N50 649
Scaffold L50 (Mbp) 0.02
# of gaps 588
% of scaffold length in gaps 0.2%
Three largest Scaffolds (Mbp) 0.08, 0.07, 0.07

Gene Models ExternalModels
length (bp) of: average median
gene 1997 1637
transcript 1535 1212
exon 409 208
intron 169 129
protein length (aa) 512 404
exons per gene 3.76 3
# of gene models 10351


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.