Info • Linnemannia gamsii AD045


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 49.26
Sequencing read coverage depth
# of contigs 3695
# of scaffolds 3359
# of scaffolds >= 2Kbp 2386
Scaffold N50 430
Scaffold L50 (Mbp) 0.03
# of gaps 336
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.31, 0.18, 0.17

Gene Models ExternalModels
length (bp) of: average median
gene 1993 1684
transcript 1536 1236
exon 416 215
intron 172 120
protein length (aa) 512 412
exons per gene 3.69 3
# of gene models 12723


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.