Info • Podila horticola CK413


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 40.42
Sequencing read coverage depth
# of contigs 2284
# of scaffolds 2108
# of scaffolds >= 2Kbp 1356
Scaffold N50 222
Scaffold L50 (Mbp) 0.06
# of gaps 176
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.26, 0.24, 0.22

Gene Models ExternalModels
length (bp) of: average median
gene 1894 1582
transcript 1480 1206
exon 394 209
intron 152 104
protein length (aa) 493 402
exons per gene 3.75 3
# of gene models 11844


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.