Info • Podila minutissima AD069

Status

This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 39.40
Sequencing read coverage depth
# of contigs 3488
# of scaffolds 3215
# of scaffolds >= 2Kbp 2127
Scaffold N50 389
Scaffold L50 (Mbp) 0.03
# of gaps 273
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.13, 0.13, 0.13


Gene Models ExternalModels
length (bp) of: average median
gene 1858 1551
transcript 1455 1179
exon 389 207
intron 149 104
description:
protein length (aa) 485 393
exons per gene 3.74 3
# of gene models 11885


Collaborators

Genome Reference(s)

Links

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.