Info • Gamsiella multidivaricata NRRL 6456

Status

This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 36.03
Sequencing read coverage depth
# of contigs 3952
# of scaffolds 3523
# of scaffolds >= 2Kbp 2417
Scaffold N50 469
Scaffold L50 (Mbp) 0.02
# of gaps 429
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.12, 0.11, 0.11


Gene Models ExternalModels
length (bp) of: average median
gene 1923 1574
transcript 1513 1203
exon 394 210
intron 146 107
description:
protein length (aa) 504 401
exons per gene 3.84 3
# of gene models 10546


Collaborators

Genome Reference(s)

Links

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.