Info • Mortierella multidivaricata RSA 2152 T v1.0

Status

[September 2016] The Mortierella multidivaricata RSA 2152 T genome was sequenced with PacBio, assembled with Falcon, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Mortierella multidivaricata RSA 2152 T v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 37.67
Sequencing read coverage depth 184.76x
# of contigs 217
# of scaffolds 217
# of scaffolds >= 2Kbp 210
Scaffold N50 35
Scaffold L50 (Mbp) 0.37
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.10, 1.04, 0.78


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 46783 38797 82.9%
Ests est.fasta 151943390 144116228 94.8%


Gene Models FilteredModels1
length (bp) of: average median
gene 1947 1666
transcript 1566 1281
exon 424 241
intron 144 107
description:
protein length (aa) 451 354
exons per gene 3.69 3
# of gene models 12248


Collaborators

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.