BLAST function on our site is limited to a single organism due to maintenance activity on our computational cluster.
Info • Morchella septentrionalis NRRL54509 v1.0

Status

[July 2021] The Morchella septentrionalis NRRL54509 v1.0 genome was sequenced with PacBio, assembled with Flye, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Genome Assembly
Genome Assembly size (Mbp) 51.48
Sequencing read coverage depth 61.77x
# of contigs 87
# of scaffolds 86
# of scaffolds >= 2Kbp 86
Scaffold N50 16
Scaffold L50 (Mbp) 1.10
# of gaps 1
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 3.08, 3.00, 1.95


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 59656 55857 93.6%
Ests est.fasta 172952316 167608275 96.9%


Gene Models FilteredModels1
length (bp) of: average median
gene 1864 1602
transcript 1631 1387
exon 446 282
intron 90 67
description:
protein length (aa) 458 365
exons per gene 3.66 3
# of gene models 10799


Collaborators



Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.