Info • Linnemannia schmuckeri NRRL 6426


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 46.05
Sequencing read coverage depth
# of contigs 3976
# of scaffolds 3515
# of scaffolds >= 2Kbp 2701
Scaffold N50 542
Scaffold L50 (Mbp) 0.03
# of gaps 461
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.12, 0.10, 0.10

Gene Models ExternalModels
length (bp) of: average median
gene 2002 1698
transcript 1524 1230
exon 403 210
intron 174 120
protein length (aa) 508 410
exons per gene 3.78 3
# of gene models 12060


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.