Info • Mortierella sp. AD031

Status

This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 44.82
Sequencing read coverage depth
# of contigs 3349
# of scaffolds 3076
# of scaffolds >= 2Kbp 2121
Scaffold N50 364
Scaffold L50 (Mbp) 0.04
# of gaps 273
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.18, 0.17, 0.15


Gene Models ExternalModels
length (bp) of: average median
gene 1919 1630
transcript 1467 1182
exon 390 207
intron 166 120
description:
protein length (aa) 489 394
exons per gene 3.76 3
# of gene models 12719


Collaborators

Genome Reference(s)

Links

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.