Info • Mortierella sp. GBA30

Status

This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 36.98
Sequencing read coverage depth
# of contigs 2006
# of scaffolds 1938
# of scaffolds >= 2Kbp 1290
Scaffold N50 222
Scaffold L50 (Mbp) 0.05
# of gaps 68
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.20, 0.19, 0.18


Gene Models ExternalModels
length (bp) of: average median
gene 2037 1687
transcript 1618 1299
exon 413 212
intron 146 108
description:
protein length (aa) 539 433
exons per gene 3.92 3
# of gene models 10471


Collaborators

Genome Reference(s)

Links

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.