Info • Mortierella sp. KOD 1030

Status

This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 38.84
Sequencing read coverage depth
# of contigs 4133
# of scaffolds 3767
# of scaffolds >= 2Kbp 2346
Scaffold N50 457
Scaffold L50 (Mbp) 0.03
# of gaps 366
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.16, 0.14, 0.13


Gene Models ExternalModels
length (bp) of: average median
gene 1816 1510
transcript 1422 1155
exon 386 209
intron 149 104
description:
protein length (aa) 474 385
exons per gene 3.69 3
# of gene models 11804


Collaborators

Genome Reference(s)

Links

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.