Info • Podila verticillata AD079


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 39.72
Sequencing read coverage depth
# of contigs 3781
# of scaffolds 3481
# of scaffolds >= 2Kbp 2432
Scaffold N50 475
Scaffold L50 (Mbp) 0.02
# of gaps 300
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.13, 0.13, 0.12

Gene Models ExternalModels
length (bp) of: average median
gene 1858 1548
transcript 1471 1185
exon 397 209
intron 145 102
protein length (aa) 490 395
exons per gene 3.71 3
# of gene models 12117


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.