Info • Podila verticillata TTC192


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 42.07
Sequencing read coverage depth
# of contigs 4093
# of scaffolds 3609
# of scaffolds >= 2Kbp 2563
Scaffold N50 509
Scaffold L50 (Mbp) 0.02
# of gaps 484
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.26, 0.25, 0.25

Gene Models ExternalModels
length (bp) of: average median
gene 1849 1507
transcript 1452 1158
exon 396 213
intron 151 103
protein length (aa) 484 386
exons per gene 3.67 3
# of gene models 12070


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.