Info • Moniliophthora roreri MCA 2997


The Moniliophthora roreri MCA 2997 genome sequence and gene models were not determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on Nov 10, 2020. In order to ensure this genome is comparable to those sequenced by the JGI, we applied filters to remove if present: 1) transposable elements, 2) pseudogenes, 3) alternative transcripts and overlapping models, 4) alleles on secondary scaffolds and 5) unsupported short models. This resulted in the removal of 2495 models from Moniliophthora roreri MCA 2997 and the generation of the FilteredModels1 gene track. All published models are available in the ExternalModels track. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into MycoCosm. The JGI Annotation Pipeline was used to add functional annotation to this genome.

Summary statistics for the Moniliophthora roreri MCA 2997 release are below.
Genome Assembly
Genome Assembly size (Mbp) 52.06
Sequencing read coverage depth 15.0x
# of contigs 3062
# of scaffolds 3062
# of scaffolds >= 2Kbp 2660
Scaffold N50 271
Scaffold L50 (Mbp) 0.05
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.57, 0.45, 0.37

Gene Models FilteredModels1
length (bp) of: average median
gene 1628 1408
transcript 1303 1090
exon 203 124
intron 62 56
protein length (aa) 434 363
exons per gene 6.42 5
# of gene models 15415

Genome Reference(s)


This project was not sequenced at the JGI.