Info • Mucor endophyticus


The genome of Mucor endophyticus UBOCC-A-113049 was not sequenced at JGI. Rather, it was sequenced and annotated by the Jany lab at the Université de Bretagne Occidentale and was imported into MycoCosm for comparative purposes. Please note that this copy of the genome is not maintained by the Jany lab and therefore is not automatically updated.

Summary statistics for the Mucor endophyticus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 35.00
Sequencing read coverage depth
# of contigs 1573
# of scaffolds 159
# of scaffolds >= 2Kbp 74
Scaffold N50 8
Scaffold L50 (Mbp) 1.96
# of gaps 1414
% of scaffold length in gaps 2.0%
Three largest Scaffolds (Mbp) 4.53, 2.23, 2.14

Gene Models ExternalModels
length (bp) of: average median
gene 1714 1400
transcript 1426 1158
exon 315 170
intron 84 67
protein length (aa) 475 386
exons per gene 4.53 4
# of gene models 11445


Emmanuel Coton, Université de Bretagne Occidentale, France

Jean-Luc Jany, Université de Bretagne Occidentale, France

Genome Reference(s)


This project was not sequenced at the JGI.