Info • Mycosphaerella fijiensis v1.0
Please note that this organism is for archival use only. Please see the current Pseudocercospora (Mycosphaerella) fijiensis v2.0 site for the latest data and information.


v.1.0 (August 20, 2007): The assembly release version 1.0 of whole genome shotgun reads was constructed with the JGI assembler, Jazz, using paired end sequencing reads at a coverage of ~7.11X. After trimming for vector and quality, 602,555 reads assembled into 395 main genome scaffolds totaling 73.4 MB. Roughly half of the genome is contained in 12 scaffolds all at least 1.99 MB in length.

The current draft release, version 1.0, includes a total of 10,327 gene models predicted and functionally annotated using the JGI annotation pipeline.




This work was performed under the auspices of the US Department of Energy's Office of Science, Biological and Environmental Research Program and the by the University of California, Lawrence Livermore National Laboratory under Contract No. W-7405-Eng-48, Lawrence Berkeley National Laboratory under contract No. DE-AC03-76SF00098 and Los Alamos National Laboratory under contract No. W-7405-ENG-36.