Info • Myriangium duriaei CBS 260.36 v1.0

Status

December 2012. The genome of Myriangium duriaei CBS 260.36 was sequenced using Illumina technology and assembled using AllPathsLG (release version R42328).

Summary statistics for the Myriangium duriaei v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 25.69
Sequencing read coverage depth 97.7x
# of contigs 32
# of scaffolds 16
# of scaffolds >= 2Kbp 16
Scaffold N50 5
Scaffold L50 (Mbp) 1.86
# of gaps 16
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 4.23, 2.43, 2.39


ESTs Data set # sequences total # mapped to genome % mapped to genome
Ests RNNotator-assembled Illumina ESTs 31057 29566 95.2%


Gene Models FilteredModels1
length (bp) of: average median
gene 1641 1385
transcript 1541 1290
exon 650 395
intron 75 56
description:
protein length (aa) 454 370
exons per gene 2.37 2
# of gene models 10685


Collaborators



Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.