Info • Neonectria ditissima R09/05


The genome sequence and gene prediction of Neonectria ditissima R09/05 have not been determined by the JGI, but were downloaded from NCBI on June 1, 2017. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Assembly Method :: Spades v. 3.1.0
Sequencing Technology :: Illumina MiSeq

Summary statistics for the Neonectria ditissima release are below.
Genome Assembly
Genome Assembly size (Mbp) 45.72
Sequencing read coverage depth 42.0x
# of contigs 677
# of scaffolds 677
# of scaffolds >= 2Kbp 577
Scaffold N50 95
Scaffold L50 (Mbp) 0.15
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.69, 0.60, 0.57

Gene Models ExternalModels
length (bp) of: average median
gene 1732 1446
transcript 1555 1302
exon 525 297
intron 92 60
protein length (aa) 518 434
exons per gene 2.96 2
# of gene models 12685

Genome Reference(s)


This project was not sequenced at the JGI.