Info • Oculimacula yallundae CBS 49480

Status

The genome sequence and gene prediction of Oculimacula yallundae CBS 49480 have not been determined by the Joint Genome Institute (JGI), but were downloaded from CSFG on July 31, 2022. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Genome Assembly
Genome Assembly size (Mbp) 48.66
# of contigs 494
# of scaffolds 59
# of scaffolds >= 2Kbp 28
Scaffold N50 9
Scaffold L50 (Mbp) 2.42
# of gaps 435
% of scaffold length in gaps 0.9%
Three largest Scaffolds (Mbp) 3.28, 3.04, 2.94


Gene Models ExternalModels
length (bp) of: average median
gene 1567 1281
transcript 1347 1104
exon 423 234
intron 102 59
description:
protein length (aa) 449 368
exons per gene 3.19 3
# of gene models 16587


Collaborators

Genome Reference(s)

Funding

This project was not sequenced at the JGI.