Info • Oidium neolycopersici UMSG2


The genome sequence and gene prediction of Oidium neolycopersici UMSG2 have not been determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on April 2, 2021. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Genome Assembly
Genome Assembly size (Mbp) 41.98
Sequencing read coverage depth 73.0x
# of contigs 13363
# of scaffolds 10900
# of scaffolds >= 2Kbp 5554
Scaffold N50 1710
Scaffold L50 (Mbp) 0.01
# of gaps 2463
% of scaffold length in gaps 0.6%
Three largest Scaffolds (Mbp) 0.05, 0.04, 0.04

Gene Models ExternalModels
length (bp) of: average median
gene 2201 1755
transcript 2024 1605
exon 652 372
intron 86 58
protein length (aa) 452 362
exons per gene 3.10 3
# of gene models 6851

Genome Reference(s)



This project was not sequenced at the JGI.