Info • Ophiocordyceps australis Map64

Status

The genome sequence and gene models of Ophiocordyceps australis Map64 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipelin


Genome Assembly
Genome Assembly size (Mbp) 23.32
Sequencing read coverage depth
# of contigs 1182
# of scaffolds 594
# of scaffolds >= 2Kbp 484
Scaffold N50 59
Scaffold L50 (Mbp) 0.11
# of gaps 588
% of scaffold length in gaps 0.4%
Three largest Scaffolds (Mbp) 0.43, 0.41, 0.37


Gene Models ExternalModels
length (bp) of: average median
gene 1618 1363
transcript 1474 1227
exon 520 268
intron 81 66
description:
protein length (aa) 491 409
exons per gene 2.83 2
# of gene models 8171


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

de Bekker C, Ohm RA, Evans HC, Brachmann A, Hughes DP
Ant-infecting Ophiocordyceps genomes reveal a high diversity of potential behavioral manipulation genes and a possible major role for enterotoxins.
Sci Rep. 2017 Oct 2;7(1):12508. doi: 10.1038/s41598-017-12863-w

Funding

This project was not sequenced at the JGI.