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Info • Ophiocordyceps kimflemingae SC16a

Status

The genome sequence and gene models of Ophiocordyceps kimflemingae SC16a were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 23.91
Sequencing read coverage depth
# of contigs 3535
# of scaffolds 2536
# of scaffolds >= 2Kbp 1383
Scaffold N50 251
Scaffold L50 (Mbp) 0.03
# of gaps 999
% of scaffold length in gaps 0.7%
Three largest Scaffolds (Mbp) 0.17, 0.13, 0.12


Gene Models ExternalModels
length (bp) of: average median
gene 1578 1300
transcript 1421 1158
exon 472 220
intron 80 64
description:
protein length (aa) 474 386
exons per gene 3.01 3
# of gene models 8577


Genome Reference(s)

Funding

This project was not sequenced at the JGI.