Info • Parauncinula polyspora


The genome sequence and gene prediction of Parauncinula polyspora have not been determined by the Joint Genome Institute (JGI), but were downloaded from the Frantzeskakis et al., 2019 genome supplemental data share at github on September 9, 2020. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by the manuscript authors and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Summary statistics for the Parauncinula polyspora release are below.
Genome Assembly
Genome Assembly size (Mbp) 28.02
Sequencing read coverage depth 30x
# of contigs 889
# of scaffolds 495
# of scaffolds >= 2Kbp 488
Scaffold N50 87
Scaffold L50 (Mbp) 0.10
# of gaps 394
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.35, 0.31, 0.30

Gene Models ExternalModels
length (bp) of: average median
gene 1700 1426
transcript 1550 1287
exon 520 267
intron 78 55
protein length (aa) 516 429
exons per gene 2.98 3
# of gene models 6046

Genome Reference(s)



This project was not sequenced at the JGI.