Status
The genome sequence and gene models of Penicillium brasilianum MG11 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.
Summary statistics for the Penicillium brasilianum MG11
are below.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 35.89 |
| Sequencing read coverage depth | 205x |
| # of contigs | 223 |
| # of scaffolds | 87 |
| # of scaffolds >= 2Kbp | 62 |
| Scaffold N50 | 5 |
| Scaffold L50 (Mbp) | 3.36 |
| # of gaps | 136 |
| % of scaffold length in gaps | 0.7% |
| Three largest Scaffolds (Mbp) | 4.66, 4.22, 4.05 |
| Gene Models | ExternalModels | |
| length (bp) of: | average | median |
| gene | 2036 | 1722 |
| transcript | 1877 | 1561 |
| exon | 605 | 343 |
| intron | 78 | 65 |
| description: | ||
| protein length (aa) | 492 | 421 |
| exons per gene | 3.10 | 3 |
| # of gene models | 11943 |
Genome Reference(s)
Please cite the following publication(s) if you use the data from this genome in your research:
Horn F, Linde J, Mattern DJ, Walther G, Guthke R, Brakhage AA, Valiante V
Draft Genome Sequence of the Fungus Penicillium brasilianum MG11.
Genome Announc. 2015 Sep 3;3(5):. doi: 10.1128/genomeA.00724-15
Horn F, Linde J, Mattern DJ, Walther G, Guthke R, Brakhage AA, Valiante V
Draft Genome Sequence of the Fungus Penicillium brasilianum MG11.
Genome Announc. 2015 Sep 3;3(5):. doi: 10.1128/genomeA.00724-15
Links
- JGI PhyloGroup Portals: Fungi Dikarya Ascomycota Pezizomycotina Eurotiomycetes Eurotiales Penicillium
Funding
This project was not sequenced at the JGI.
