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Info • Penicillium digitatum PHI26

Status

This genome was sequenced by Marina Marcet-Houben et al in Centre for Genomic Regulation (CRG), Dr. Aiguader 88, Barcelona, 08003, Spain (Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus). Please check their data use policies.

Summary statistics for the Penicillium digitatum PHI26 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 25.96
Sequencing read coverage depth 83x
# of contigs 304
# of scaffolds 100
# of scaffolds >= 2Kbp 86
Scaffold N50 8
Scaffold L50 (Mbp) 0.88
# of gaps 204
% of scaffold length in gaps 1.3%
Three largest Scaffolds (Mbp) 4.55, 1.90, 1.45


Gene Models ExternalModels
length (bp) of: average median
gene 1523 1257
transcript 1391 1131
exon 522 270
intron 82 62
description:
protein length (aa) 464 377
exons per gene 2.67 2
# of gene models 9118


Genome Reference(s)

Funding

This project was not sequenced at the JGI.