Info • Penicillium expansum d1


The genome sequence and gene models of Penicillium expansum d1 have not been determined by the JGI, but were downloaded from NCBI on 6/6/2017. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Penicillium expansum d1 release are below.
Genome Assembly
Genome Assembly size (Mbp) 32.07
Sequencing read coverage depth
# of contigs 270
# of scaffolds 270
# of scaffolds >= 2Kbp 222
Scaffold N50 27
Scaffold L50 (Mbp) 0.36
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.16, 1.01, 0.98

Gene Models ExternalModels
length (bp) of: average median
gene 1684 1406
transcript 1512 1257
exon 482 253
intron 83 61
protein length (aa) 504 419
exons per gene 3.14 3
# of gene models 11023

Genome Reference(s)


This project was not sequenced at the JGI.