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Info • Phaeoacremonium aleophilum UCRPA7

Status

This genome was sequenced by Barbara Blanco-Ulate, Dario Cantu (dacantu@ucdavis.edu) et al in Department of Viticulture and Enology, University of California-Davis, Davis, California, USA (Draft Genome Sequence of the Ascomycete Phaeoacremonium aleophilum Strain UCR-PA7, a Causal Agent of the Esca Disease Complex in Grapevines).

Summary statistics for the Phaeoacremonium aleophilum UCRPA7 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 47.47
Sequencing read coverage depth 100x
# of contigs 1083
# of scaffolds 624
# of scaffolds >= 2Kbp 387
Scaffold N50 45
Scaffold L50 (Mbp) 0.33
# of gaps 459
% of scaffold length in gaps 0.2%
Three largest Scaffolds (Mbp) 1.63, 1.28, 1.03


Gene Models ExternalModels
length (bp) of: average median
gene 1512 1274
transcript 1331 1110
exon 479 262
intron 103 63
description:
protein length (aa) 444 370
exons per gene 2.78 2
# of gene models 8834


Genome Reference(s)

Funding

This project was not sequenced at the JGI.