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Info • Phaeoacremonium sp. FL0889 v1.0

Status

[July 2017] The Phaeoacremonium sp. FL0889 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Phaeoacremonium sp. FL0889 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 48.12
Sequencing read coverage depth 90.9x
# of contigs 101
# of scaffolds 56
# of scaffolds >= 2Kbp 47
Scaffold N50 6
Scaffold L50 (Mbp) 3.66
# of gaps 45
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 5.36, 5.21, 4.31


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 40051 39922 99.7%
Ests est.fasta 108601466 108533290 99.9%


Gene Models FilteredModels1
length (bp) of: average median
gene 1779 1611
transcript 1623 1461
exon 530 323
intron 78 62
description:
protein length (aa) 479 422
exons per gene 3.06 3
# of gene models 17000


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.