Info • Phellinus ferrugineofuscus SpK3Phefer14 v1.0


[May 2017] The Phellinus ferrugineofuscus SpK3Phefer14 genome was sequenced with PacBio, assembled with Falcon, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Phellinus ferrugineofuscus SpK3Phefer14 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 36.89
Sequencing read coverage depth 38.52x
# of contigs 661
# of scaffolds 661
# of scaffolds >= 2Kbp 647
Scaffold N50 37
Scaffold L50 (Mbp) 0.28
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.37, 1.11, 1.08

ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 29460 26776 90.9%
Ests est.fasta 256361982 97913673 38.2%

Gene Models FilteredModels1
length (bp) of: average median
gene 1871 1621
transcript 1484 1269
exon 227 142
intron 72 61
protein length (aa) 439 360
exons per gene 6.55 5
# of gene models 11139


Francis Martin, INRA Nancy, France

Sundy Maurice, University of Oslo, Norway


The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.