Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
Info • Pichia kudriavzevii CBS573

Status

The genome sequence and gene prediction of Pichia kudriavzevii CBS573 have not been determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on Nov 25, 2018. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Summary statistics for the Pichia kudriavzevii CBS573 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 10.81
Sequencing read coverage depth 93.8x
# of contigs 5
# of scaffolds 5
# of scaffolds >= 2Kbp 5
Scaffold N50 2
Scaffold L50 (Mbp) 2.75
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 2.85, 2.75, 2.54


Gene Models ExternalModels
length (bp) of: average median
gene 1550 1296
transcript 1541 1290
exon 1480 1242
intron 224 129
description:
protein length (aa) 514 430
exons per gene 1.04 1
# of gene models 5140


Genome Reference(s)

Funding

This project was not sequenced at the JGI.