Info • Pneumocystis murina B123

Status

The genome sequence and gene models of Pneumocystis murina B123 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 7.50
Sequencing read coverage depth
# of contigs 20
# of scaffolds 20
# of scaffolds >= 2Kbp 20
Scaffold N50 7
Scaffold L50 (Mbp) 0.49
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.59, 0.56, 0.55


Gene Models ExternalModels
length (bp) of: average median
gene 1714 1398
transcript 1474 1194
exon 246 149
intron 50 47
description:
protein length (aa) 460 360
exons per gene 6.00 5
# of gene models 3623


Genome Reference(s)

Links

Funding

This project was not sequenced at the JGI.