Info • Pseudozyma antarctica T-34


This genome was sequenced by Tomotake Morita, Dai Kitamoto ([email protected]) et al. at the Research Institute for Innovation in Sustainable Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan (Genome Sequence of the Basidiomycetous Yeast Pseudozyma antarctica T-34, a Producer of the Glycolipid Biosurfactants Mannosylerythritol Lipids).

Summary statistics for the Pseudozyma antarctica T-34 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 18.07
Sequencing read coverage depth 20x
# of contigs 744
# of scaffolds 27
# of scaffolds >= 2Kbp 27
Scaffold N50 7
Scaffold L50 (Mbp) 0.73
# of gaps 717
% of scaffold length in gaps 1.3%
Three largest Scaffolds (Mbp) 2.38, 2.07, 1.56

Gene Models ExternalModels
length (bp) of: average median
gene 2000 1632
transcript 1823 1509
exon 1057 622
intron 176 96
protein length (aa) 608 503
exons per gene 1.72 1
# of gene models 6640

Genome Reference(s)


This project was not sequenced at the JGI.