Info • Rhodosporidium toruloides NP11


The genome sequence and gene prediction of Rhodosporidium toruloides NP11 have not been determined by the JGI, but were downloaded from Genbank on Dec 5th, 2014. Please note that this copy of the genome is not maintained by the authors and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Summary statistics for the Rhodosporidium toruloides NP11 release are below.
Genome Assembly
Genome Assembly size (Mbp) 20.22
Sequencing read coverage depth 1x
# of contigs 181
# of scaffolds 94
# of scaffolds >= 2Kbp 71
Scaffold N50 11
Scaffold L50 (Mbp) 0.57
# of gaps 87
% of scaffold length in gaps 0.2%
Three largest Scaffolds (Mbp) 1.53, 1.52, 1.42

Gene Models ExternalModels
length (bp) of: average median
gene 1995 1678
transcript 1601 1314
exon 256 146
intron 77 64
protein length (aa) 534 438
exons per gene 6.26 5
# of gene models 8140

Genome Reference(s)


This project was not sequenced at the JGI.