Info • Saccharomyces cerevisiae S288C


The genome sequence and gene prediction of Saccharomyces cerevisiae strain S288C have not been determined by the JGI, but were downloaded from the Saccharomyces Genome Database (SGD, on November 30th 2010. Please note that this copy of the genome is not maintained by SGD and is therefore not automatically updated. This copy of the genome does not include the mitochondrial and 2-micron plasmid DNA. JGI tools were used to automatically annotate predicted proteins.

Summary statistics for the Saccharomyces cerevisiae S288C v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 12.07
Sequencing read coverage depth ?
# of contigs 16
# of scaffolds 16
# of scaffolds >= 2Kbp 16
Scaffold N50 6
Scaffold L50 (Mbp) 0.92
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.53, 1.09, 1.09

ESTs Data set # sequences total # mapped to genome % mapped to genome
Ests ESTs 2933 2850 97.2%

Gene Models ExternalModels
length (bp) of: average median
gene 1341 1071
transcript 1329 1062
exon 1274 1017
intron 235 141
protein length (aa) 443 354
exons per gene 1.04 1
# of gene models 6575

Genome Reference(s)


This project was not sequenced at the JGI.