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Info • Saccharomyces cerevisiae M3707 Dikaryon

Status

The Saccharomyces cerevisiae M3707 genome was sequenced using the Illumina platform and assembled with AllPathsLG.

Summary statistics for the Saccharomyces cerevisiae M3707 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 11.51
Sequencing read coverage depth 125.6x
# of contigs 97
# of scaffolds 42
# of scaffolds >= 2Kbp 37
Scaffold N50 7
Scaffold L50 (Mbp) 0.68
# of gaps 55
% of scaffold length in gaps 0.4%
Three largest Scaffolds (Mbp) 1.11, 1.03, 0.89


ESTs Data set # sequences total # mapped to genome % mapped to genome
Other Illumina RNASeq assemblies 6134 5245 85.5%


Gene Models FilteredModels1
length (bp) of: average median
gene 1415 1161
transcript 1402 1152
exon 1290 1049
intron 152 83
description:
protein length (aa) 459 378
exons per gene 1.09 1
# of gene models 5974


Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.