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Info • Saccharomyces cerevisiae M3838 v1.0

Status

The Saccharomyces cerevisiae M3838 genome was sequenced using the Illumina platform and assembled with AllPathsLG.

Summary statistics for the Saccharomyces cerevisiae M3838 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 11.57
Sequencing read coverage depth 95.6x
# of contigs 84
# of scaffolds 34
# of scaffolds >= 2Kbp 30
Scaffold N50 7
Scaffold L50 (Mbp) 0.68
# of gaps 50
% of scaffold length in gaps 0.4%
Three largest Scaffolds (Mbp) 1.47, 1.03, 0.88


ESTs Data set # sequences total # mapped to genome % mapped to genome
Other Illumina RNASeq assemblies 6134 5276 86.0%


Gene Models FilteredModels1
length (bp) of: average median
gene 1411 1157
transcript 1398 1149
exon 1285 1044
intron 155 85
description:
protein length (aa) 458 377
exons per gene 1.09 1
# of gene models 5991


Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.