Info • Scheffersomyces virginianus NRRL Y-48822T v1.0

Status

[December 2020] The Scheffersomyces virginianus NRRL Y-48822T v1.0 genome was sequenced with PacBio, assembled with Falcon, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Scheffersomyces virginianus NRRL Y-48822T v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 17.75
Sequencing read coverage depth 616.35x
# of contigs 16
# of scaffolds 16
# of scaffolds >= 2Kbp 16
Scaffold N50 4
Scaffold L50 (Mbp) 2.18
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 3.22, 2.35, 2.20


Gene Models FilteredModels2
length (bp) of: average median
gene 1563 1314
transcript 1514 1278
exon 1150 981
intron 155 88
description:
protein length (aa) 505 426
exons per gene 1.32 1
# of gene models 6121


Collaborators

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.