Info • Smittium mucronatum ALG-7-W6


The genome sequence and gene models of Smittium mucronatum ALG-7-W6 were not determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on July 3rd, 2017. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. JGI tools were used to automatically annotate predicted proteins. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Smittium mucronatum ALG-7-W6 release are below.
Genome Assembly
Genome Assembly size (Mbp) 102.35
Sequencing read coverage depth
# of contigs 10612
# of scaffolds 7797
# of scaffolds >= 2Kbp 6882
Scaffold N50 1304
Scaffold L50 (Mbp) 0.02
# of gaps 2815
% of scaffold length in gaps 1.2%
Three largest Scaffolds (Mbp) 0.20, 0.18, 0.16

Gene Models ExternalModels
length (bp) of: average median
gene 2047 1508
transcript 1197 804
exon 532 236
intron 147 92
protein length (aa) 399 268
exons per gene 2.25 2
# of gene models 8247


Yan Wang, University of Toronto

Genome Reference(s)


This project was not sequenced at the JGI.