Info • Sporothrix insectorum RCEF 264


The Sporothrix insectorum RCEF 264 genome sequence and gene models were not determined by the Joint Genome Institute (JGI) but were downloaded from Ensembl Fungi on Apr 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into MycoCosm. The JGI Annotation Pipeline was used to add the functional annotation to this genome.

Genome Assembly
Genome Assembly size (Mbp) 34.72
Sequencing read coverage depth
# of contigs 572
# of scaffolds 78
# of scaffolds >= 2Kbp 63
Scaffold N50 7
Scaffold L50 (Mbp) 1.74
# of gaps 494
% of scaffold length in gaps 0.5%
Three largest Scaffolds (Mbp) 3.55, 3.14, 2.92

Gene Models ExternalModels
length (bp) of: average median
gene 1830 1548
transcript 1634 1362
exon 590 310
intron 113 85
protein length (aa) 545 454
exons per gene 2.77 2
# of gene models 9496

Genome Reference(s)


This project was not sequenced at the JGI.