Info • Sporobolomyces roseus v1.0


v.1.0 (December 22, 2006): The assembly release version 1.0 of whole genome shotgun reads was constructed with the JGI assembler, Jazz, using paired end sequencing reads at a coverage of 8.1x. After trimming for vector and quality, 244,257 reads assembled into 76 scaffolds totaling 21.2 Mb. Roughly half of the genome is contained in 4 scaffolds all at least 2.22 Mb in length.

The current draft release, version 1.0, includes a total of 5536 gene models predicted and functionally annotated using the JGI annotation pipeline.


  • Kenneth H. Wolfe, Smurfit Institute of Genetics, University of Dublin, Trinity College


The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.