Info • Suillus luteus UH-Slu-Lm8-n1 v2.0
Please note that this organism is for archival use only. Please see the current Suillus luteus UH-Slu-Lm8-n1 v3.0 site for the latest data and information.


Assembly v2 (December 2014) is a standard draft assembly of Illumina gDNA reads using AllPathsLG.

Summary statistics for the Suillus luteus UH-Slu-Lm8-n1 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 41.74
Sequencing read coverage depth 88.8x
# of contigs 1365
# of scaffolds 649
# of scaffolds >= 2Kbp 488
Scaffold N50 49
Scaffold L50 (Mbp) 0.25
# of gaps 716
% of scaffold length in gaps 2.0%
Three largest Scaffolds (Mbp) 1.38, 1.27, 0.85

ESTs Data set # sequences total # mapped to genome % mapped to genome
Other JGI_RNA_contigs 43774 41588 95.0%

Gene Models FilteredModels1
length (bp) of: average median
gene 1575 1303
transcript 1302 1053
exon 245 155
intron 65 55
protein length (aa) 376 293
exons per gene 5.32 4
# of gene models 16744

Genome Reference(s)


The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.