Info • Suillus luteus 16.09.17.av07 v1.0


[April 2021] The Suillus luteus 16.09.17.av07 nuclear genome was sequenced with Illumina, assembled with SPAdes, and annotated with the JGI Annotation Pipeline. No transcriptome was available, so the transcriptome of the Suillus subalutaceus FC151 strain was used, accounting for the low RNA mapping. The mitochondrial genome was assembled separately and is available on the Download tab.

Genome Assembly
Genome Assembly size (Mbp) 39.23
Sequencing read coverage depth 86.62x
# of contigs 1574
# of scaffolds 1460
# of scaffolds >= 2Kbp 1093
Scaffold N50 122
Scaffold L50 (Mbp) 0.08
# of gaps 114
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.56, 0.46, 0.45

ESTs Data set # sequences total # mapped to genome % mapped to genome
Ests est.fasta 71503297 50907015 71.2%
Other JGI_RNA_contigs 73958 442 0.6%

Gene Models FilteredModels1
length (bp) of: average median
gene 1640 1380
transcript 1308 1066
exon 217 138
intron 68 55
protein length (aa) 423 344
exons per gene 6.01 5
# of gene models 13348


The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.