Status
[August 2021] This genome was not sequenced or assembled at the JGI. Rather, the assembly was provided by Diego Jimenez on June 22, 2021 and then annotated using the JGI annotation pipeline. The mitochondrial sequence was extracted, annotated and is available on the download page as well as the 'mitochondrion' tab.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 35.60 |
| Sequencing read coverage depth | |
| # of contigs | 872 |
| # of scaffolds | 872 |
| # of scaffolds >= 2Kbp | 424 |
| Scaffold N50 | 52 |
| Scaffold L50 (Mbp) | 0.21 |
| # of gaps | 0 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 0.63, 0.61, 0.60 |
| Gene Models | FilteredModels1 | |
| length (bp) of: | average | median |
| gene | 1640 | 1411 |
| transcript | 1471 | 1248 |
| exon | 453 | 247 |
| intron | 77 | 60 |
| description: | ||
| protein length (aa) | 490 | 416 |
| exons per gene | 3.25 | 3 |
| # of gene models | 12796 |
Collaborators
- Diego Jimenez, Universidad de los Andes, Bogotá, Colombia
Links
- JGI PhyloGroup Portals: Fungi Dikarya Ascomycota Pezizomycotina Eurotiomycetes Eurotiales
Funding
The work conducted by the U.S. Department of Energy Joint Genome
Institute, a DOE Office of Science User Facility, is supported by
the Office of Science of the U.S. Department of Energy under
Contract No. DE-AC02-05CH11231.
