Info • Talaromyces sp. HC1 v1.0


[August 2021] This genome was not sequenced or assembled at the JGI. Rather, the assembly was provided by Diego Jimenez on June 22, 2021 and then annotated using the JGI annotation pipeline. The mitochondrial sequence was extracted, annotated and is available on the download page as well as the 'mitochondrion' tab.

Genome Assembly
Genome Assembly size (Mbp) 35.60
Sequencing read coverage depth
# of contigs 872
# of scaffolds 872
# of scaffolds >= 2Kbp 424
Scaffold N50 52
Scaffold L50 (Mbp) 0.21
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.63, 0.61, 0.60

Gene Models FilteredModels1
length (bp) of: average median
gene 1640 1411
transcript 1471 1248
exon 453 247
intron 77 60
protein length (aa) 490 416
exons per gene 3.25 3
# of gene models 12796



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.