Info • Talaromyces atroroseus IBT 11181

Status

The genome sequence and gene models of Talaromyces atroroseus IBT 11181 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.

Summary statistics for the Talaromyces atroroseus IBT 11181 are below.
Genome Assembly
Genome Assembly size (Mbp) 30.86
Sequencing read coverage depth 193x
# of contigs 130
# of scaffolds 48
# of scaffolds >= 2Kbp 46
Scaffold N50 7
Scaffold L50 (Mbp) 1.58
# of gaps 82
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 3.27, 3.01, 2.94


Gene Models ExternalModels
length (bp) of: average median
gene 1795 1502
transcript 1583 1326
exon 464 244
intron 90 67
description:
protein length (aa) 528 442
exons per gene 3.41 3
# of gene models 9523


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Thrane U, Rasmussen KB, Petersen B, Rasmussen S, Sicheritz-Pontén T, Mortensen UH
Genome Sequence of Talaromyces atroroseus, Which Produces Red Colorants for the Food Industry.
Genome Announc. 2017 Mar 2;5(9):. doi: 10.1128/genomeA.01736-16

Funding

This project was not sequenced at the JGI.