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Info • Thermoascus aurantiacus v1.0

Status

This draft release was produced using Illumina data assembled with AllPathsLG. The genome was annotated with the JGI annotation pipeline and custom analyses.

Summary statistics for the Thermoascus aurantiacus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 28.49
Sequencing read coverage depth 95.9
# of contigs 196
# of scaffolds 48
# of scaffolds >= 2Kbp 33
Scaffold N50 5
Scaffold L50 (Mbp) 2.25
# of gaps 148
% of scaffold length in gaps 0.2%
Three largest Scaffolds (Mbp) 3.45, 3.10, 3.01


Gene Models FilteredModels1
length (bp) of: average median
gene 1659 1396
transcript 1419 1173
exon 426 231
intron 105 68
description:
protein length (aa) 473 391
exons per gene 3.33 3
# of gene models 8798


Collaborators

Steven Singer, Lawrence Berkeley National Laboratory

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.